Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGTGGCGACCGCGGCTGGAGT
((.(((((((((((((.....&.))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014685
GeneSymbolHERPUD1
Binding site177,202
Score0.923
Seed0
Au0.294
Energy-26.2
Binding len18
Me-5.495
Phylopstem1.8746364076923077
Phylopflank2.944388864999999
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end3
PositionCDS
2D Structure