Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACGCCGCAAGCA
.....(((((((.((((((((&))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014687
GeneSymbolRUBCN
Binding site3851,3868
Score0.923
Seed0
Au0.368
Energy-22.2
Binding len17
Me-14.955
Phylopstem0.029659124999999953
Phylopflank0.1484705349999999
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end8
Position3UTR
2D Structure