Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTACAGCCGCCCAAGCCCCCTTGTAC
.((((((((((((((((((((&)))))))))))))...))).....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014688
GeneSymbolUSP6NL
Binding site2339,2368
Score1.0
Seed1
Au0.441
Energy-22.2
Binding len29
Me-3.793
Phylopstem0.4247684571428572
Phylopflank0.17163820125
Longest consecutive pairings13
Position of longest consecutive pairings16
Pairings in 3prime end8
PositionCDS
2D Structure