Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CGCAGCTGCC
..(((((((((..........&))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014688
GeneSymbolUSP6NL
Binding site1688,1698
Score1.0
Seed1
Au0.544
Energy-19.0
Binding len10
Me-11.418
Phylopstem0.33587206666666664
Phylopflank0.09171226750000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure