Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCAAACAGGAGTTGCTCAGGGACAGCTTCCGGAGCTGCGAG
((((((((.(((..((.....&.))..))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353443
GeneSymbolSEC14L6
Binding site787,832
Score0.962
Seed1
Au0.382
Energy-22.7
Binding len18
Me-7.14
Phylopstem-0.050521874999999994
Phylopflank-0.16638053749999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure