Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTACATTGCAACAAAGTCCCCAGGTG
((((((....((((((((((((&))))))))))))...........)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014691
GeneSymbolAQR
Binding site5640,5670
Score0.923
Seed0
Au0.618
Energy-19.8
Binding len30
Me-10.094
Phylopstem5.169958750000001
Phylopflank5.585550037499997
Longest consecutive pairings12
Position of longest consecutive pairings18
Pairings in 3prime end8
Position3UTR
2D Structure