Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAACCAAAATAAGCTGGCTGTT
..((((((((((((((.((((&)))))))))).......)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014691
GeneSymbolAQR
Binding site6540,6567
Score1.0
Seed1
Au0.588
Energy-19.8
Binding len27
Me-4.957
Phylopstem5.342914236363637
Phylopflank3.2940216475
Longest consecutive pairings10
Position of longest consecutive pairings17
Pairings in 3prime end7
Position3UTR
2D Structure