Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTGGCCTGCAGGCTGCAC
.((((((((((((((..((((&)))).))))).)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014692
GeneSymbolSEC14L5
Binding site6361,6383
Score0.846
Seed1
Au0.382
Energy-22.4
Binding len22
Me-4.026
Phylopstem-0.17085055624999998
Phylopflank0.049303238750000006
Longest consecutive pairings5
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure