Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGAAACAAGCAGCAGTAT
.(((.(((((..(((((((((&)))))))))......))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014695
GeneSymbolCCDC144A
Binding site3817,3842
Score1.0
Seed0
Au0.559
Energy-20.4
Binding len25
Me-14.084
Phylopstem1.2682864222222223
Phylopflank1.9601463658750002
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end8
PositionCDS
2D Structure