Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAACAATCTGACAGCTGA
...(((((((((((((..(((&)))..)))).))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014695
GeneSymbolCCDC144A
Binding site2811,2832
Score0.846
Seed0
Au0.574
Energy-18.4
Binding len21
Me-6.515
Phylopstem1.4622927000000001
Phylopflank2.2531306675000007
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure