Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCAAAGACCGGGGCTGCC
..((((((.(((((....(((&.)))...))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014700
GeneSymbolRAB11FIP3
Binding site2772,2794
Score0.846
Seed1
Au0.309
Energy-23.6
Binding len20
Me-6.982
Phylopstem-0.31255106666666665
Phylopflank-0.401420905
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure