Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGTCCTGGGCAGCAGAAGTCCAGCAACTGCAGCTCGCT
..((((((((((((((..((.&.)).)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014701
GeneSymbolSECISBP2L
Binding site3231,3272
Score1.0
Seed1
Au0.5
Energy-24.1
Binding len20
Me-4.957
Phylopstem-0.005102426666666648
Phylopflank0.31764807749999996
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure