Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTATCAAAAGCAGCTGGAAA
((.(((((((..(((((((((&)))))).)))..))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014701
GeneSymbolSECISBP2L
Binding site1434,1457
Score0.846
Seed0
Au0.676
Energy-21.5
Binding len23
Me-11.667
Phylopstem0.9628232600000001
Phylopflank0.8413636625000003
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end8
PositionCDS
2D Structure