Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTAGTCCCAGCTGCT
..(((((((.((.....((((&)))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014702
GeneSymbolKIAA0408
Binding site6059,6078
Score0.846
Seed1
Au0.397
Energy-20.6
Binding len19
Me-9.314
Phylopstem1.5215797142857144
Phylopflank2.71069830375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure