Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAATACAGCAAAATCACAGCTGCT
..(((((((.(((((((..((&))..)))))).....).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014702
GeneSymbolKIAA0408
Binding site1706,1731
Score0.846
Seed1
Au0.574
Energy-18.4
Binding len25
Me-6.2
Phylopstem0.4705932583333334
Phylopflank0.17770312999999996
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure