Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGCCCGGAGCCGGC
..((((((((...((((((...&))))))...)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001353453
GeneSymbolCCDC160
Binding site35,53
Score0.846
Seed1
Au0.206
Energy-23.5
Binding len18
Me-12.418
Phylopstem0.08883859499999999
Phylopflank0.1120091062647059
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure