Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCATAGCTGCTGAGGTGAGGAGCCCAAGCATGGAATCAAAGCTGCAC
.(((((((((((((((..(((&))).)))))))).............................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014708
GeneSymbolKNTC1
Binding site3286,3335
Score0.846
Seed1
Au0.426
Energy-19.5
Binding len49
Me-3.793
Phylopstem0.8177248051136363
Phylopflank1.6339167106249999
Longest consecutive pairings8
Position of longest consecutive pairings37
Pairings in 3prime end6
PositionCDS
2D Structure