Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTATGACCTGCAGCTTTGGAATGGACTCTTGCAAA
((((((((((((((((.((((&)))))))))).))))))...............)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014708
GeneSymbolKNTC1
Binding site6092,6129
Score0.846
Seed1
Au0.603
Energy-18.3
Binding len37
Me-3.938
Phylopstem4.452461937500001
Phylopflank3.4620751529875
Longest consecutive pairings10
Position of longest consecutive pairings27
Pairings in 3prime end7
PositionCDS
2D Structure