Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGACTGCAGATAGCAGC
((((..((((((((((.....&))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353453
GeneSymbolCCDC160
Binding site382,400
Score0.846
Seed0
Au0.618
Energy-17.8
Binding len18
Me-9.958
Phylopstem-1.1852036
Phylopflank0.3463207346250002
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure