Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTAGATGGCCGCTCCTGCT
..((((..((((((((.((((&))))..))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014709
GeneSymbolUSP34
Binding site9198,9219
Score0.846
Seed0
Au0.588
Energy-19.7
Binding len21
Me-8.814
Phylopstem4.0923825
Phylopflank3.2345371875000004
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end7
PositionCDS
2D Structure