Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATAGAGGCAGATTGCC
..((((((((..(((((((((&)))))))))..)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014709
GeneSymbolUSP34
Binding site11401,11422
Score0.923
Seed1
Au0.559
Energy-19.7
Binding len21
Me-11.129
Phylopstem0.6481697222222222
Phylopflank0.8265988662500001
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end8
Position3UTR
2D Structure