Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCAGCAACTGCAGCAGCAGC
((((.(((((((((((..(((&)))...))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014712
GeneSymbolSETD1A
Binding site4275,4298
Score0.846
Seed0
Au0.309
Energy-26.4
Binding len23
Me-8.057
Phylopstem0.7389827454545455
Phylopflank1.7290048524999997
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure