Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCAGCAGCTGTT
..((((((((((((((.....&)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014712
GeneSymbolSETD1A
Binding site5595,5611
Score0.846
Seed1
Au0.471
Energy-23.4
Binding len16
Me-4.957
Phylopstem0.8877250666666665
Phylopflank1.39527964
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure