Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTAGAGGCACATTTGTCTTCATTGATACAGACCCAGAGAAGAGGGGCCT
....(((((((((((((((...&.)))))))...)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001353486
GeneSymbolSPATA6L
Binding site2261,2310
Score0.923
Seed0
Au0.588
Energy-25.9
Binding len20
Me-9.547
Phylopstem0.4377582833333334
Phylopflank0.3077879937499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure