Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCCAATGGCAGCTGCC
..((((((((.((((...(((&)))..)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014718
GeneSymbolCLSTN3
Binding site3427,3446
Score0.923
Seed1
Au0.412
Energy-23.5
Binding len19
Me-8.015
Phylopstem-0.20958185000000004
Phylopflank-0.23257736625000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure