Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGCATGTGCCTGTGGTCCTAGCTACTTGGGAGGCTGAAGTGGGA
...(((..(((((((((((((&)))))..........................))))))))....))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_014719
GeneSymbolTCAF1
Binding site3891,3938
Score0.846
Seed0
Au0.441
Energy-22.6
Binding len47
Me-10.372
Phylopstem2.364400564102564
Phylopflank1.4538981700000002
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end8
Position3UTR
2D Structure