Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCGTCCATGAGCTGGGCCGCAACCAGCAGCGGCAGG
((((.(((((((((((..(((&.))))))))).))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014719
GeneSymbolTCAF1
Binding site2490,2529
Score0.846
Seed0
Au0.309
Energy-24.8
Binding len22
Me-8.057
Phylopstem0.02355681666666666
Phylopflank0.1665447625
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure