Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAGTCAAAAAAGGTCCAGTTTTACAGCCTGCAATTAATTCAGGGCTGCGT
.(((((((((((((((((((.&.)))))))))).)))...........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014721
GeneSymbolPHACTR2
Binding site5430,5484
Score0.885
Seed1
Au0.662
Energy-21.1
Binding len33
Me-3.793
Phylopstem-0.13138362258064512
Phylopflank0.14933795625
Longest consecutive pairings10
Position of longest consecutive pairings22
Pairings in 3prime end7
Position3UTR
2D Structure