Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCACTCCATCCGCAGGATCAGCTGCCGCTCGCTGA
...((((.(((((((((((((&))))))))....................)))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014723
GeneSymbolSNPH
Binding site1659,1699
Score0.923
Seed0
Au0.279
Energy-22.1
Binding len40
Me-8.828
Phylopstem3.40878303939394
Phylopflank2.527906819999999
Longest consecutive pairings8
Position of longest consecutive pairings32
Pairings in 3prime end8
PositionCDS
2D Structure