Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAAACCCAGCTCCTGCCCCAGGCACTACCGCCACCACAGCCACAGCTGCAGC
(((((((((.((((((..(((&.)))...)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014727
GeneSymbolKMT2B
Binding site2242,2300
Score0.923
Seed1
Au0.309
Energy-27.2
Binding len24
Me-5.18
Phylopstem0.46359900000000004
Phylopflank0.4891472662500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure