Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTACAGCTTTTCTAGAGCAGCTGTG
..(((((((((((((((((..&)))))))))........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014729
GeneSymbolTOX
Binding site3946,3972
Score0.923
Seed1
Au0.529
Energy-21.3
Binding len26
Me-4.957
Phylopstem1.105837276
Phylopflank3.5557155375000002
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure