Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAGTGGCTGCACTGCTGCC
..((((((((((((.((((((&))))))..)))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014734
GeneSymbolSUSD6
Binding site1653,1676
Score0.846
Seed1
Au0.338
Energy-23.4
Binding len23
Me-5.692
Phylopstem0.8000486714285712
Phylopflank0.43023682987499995
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure