Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGCCTCCGGAGCCATGGGAACAGGGCTGCGAA
(((((((((.((((((.((((&)))))))))).).................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353554
GeneSymbolC11orf86
Binding site40,78
Score0.846
Seed1
Au0.324
Energy-21.6
Binding len38
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings28
Pairings in 3prime end7
Position5UTR
2D Structure