Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCCGACTGCGGTTATATCACTATGACCTTACTAGCATTGCAGT
(((((((((((((((.((((.&)))).)))))))))).........................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014743
GeneSymbolKIAA0232
Binding site4970,5016
Score0.846
Seed1
Au0.559
Energy-20.8
Binding len46
Me-4.171
Phylopstem0.56107728
Phylopflank1.41792236625
Longest consecutive pairings10
Position of longest consecutive pairings31
Pairings in 3prime end6
Position3UTR
2D Structure