Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTTGGCTGCTGCAGCTAGCC
..(((((((((((.(((((((&)))))..)).))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014743
GeneSymbolKIAA0232
Binding site5578,5601
Score0.846
Seed1
Au0.5
Energy-20.5
Binding len23
Me-5.814
Phylopstem2.3638705833333336
Phylopflank1.1855432824999999
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end7
Position3UTR
2D Structure