Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAGACAACCATGGCTGCT
..(((((((.((((((((((.&))))..)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014746
GeneSymbolRNF144A
Binding site4029,4050
Score0.846
Seed1
Au0.353
Energy-23.2
Binding len21
Me-6.2
Phylopstem-0.3223910666666666
Phylopflank-0.5740111225000002
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure