Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGTGATGTTGGGTT
(((((((((.((.(((((....&))))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014747
GeneSymbolRIMS3
Binding site4471,4489
Score0.846
Seed1
Au0.426
Energy-16.6
Binding len18
Me-6.469
Phylopstem0.02434594444444449
Phylopflank0.35660753750000007
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure