Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGGAGCTGCCTGCAGAGAGGCCTGCCACTGGGGGTTC
.((((((((((.(((((((((&))))))))))))).....................)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_014747
GeneSymbolRIMS3
Binding site3774,3815
Score0.846
Seed1
Au0.309
Energy-28.4
Binding len41
Me-7.14
Phylopstem0.2293401290322581
Phylopflank-0.06649208999999998
Longest consecutive pairings13
Position of longest consecutive pairings28
Pairings in 3prime end8
Position3UTR
2D Structure