Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGAGGCTGTAGCTGCAAA
((((((((((((((...(((.&)))...)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014748
GeneSymbolSNX17
Binding site553,574
Score0.923
Seed1
Au0.515
Energy-26.9
Binding len21
Me-4.906
Phylopstem4.472535742857143
Phylopflank4.0606035
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure