Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGCACCCCGTCCTCGCTGCAGAAGAGGCTGCGAGTCCGAGGTGGGTCTC
(((((((((((((((..((((&)))).....................)))))))))..........)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_014751
GeneSymbolMTSS1
Binding site370,421
Score0.846
Seed1
Au0.397
Energy-23.0
Binding len51
Me-4.171
Phylopstem1.8409768000000006
Phylopflank3.3164510712500004
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position5UTR
2D Structure