Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAGGTCTACCTGGGCAGCCGGAGCTGTG
..((((((.(((((((.((((&.))))..))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353655
GeneSymbolCDCP2
Binding site1275,1306
Score0.846
Seed1
Au0.294
Energy-27.9
Binding len22
Me-6.013
Phylopstem0.8941734285714286
Phylopflank3.0297338600000012
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure