Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGAGGCGGACAAGATGGCGGCGGCAGCTGTAC
.(((((((((.(((((.....&.))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014752
GeneSymbolSPCS2
Binding site5,39
Score1.0
Seed1
Au0.309
Energy-23.7
Binding len17
Me-6.618
Phylopstem1.2316719111111112
Phylopflank2.6652173237499994
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure