Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTCCTTAAGTAGCATTGCATTGAGTGTTAGGTT
(((((((((.((((((((....&.)))))))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014754
GeneSymbolPTDSS1
Binding site3977,4011
Score0.846
Seed1
Au0.662
Energy-19.1
Binding len20
Me-5.18
Phylopstem-0.2259047111111111
Phylopflank-0.30303227375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure