Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGAACCACAGCTGCT
..(((((((.((((.(..(((&)))).)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014754
GeneSymbolPTDSS1
Binding site3737,3755
Score0.846
Seed1
Au0.5
Energy-21.8
Binding len18
Me-6.935
Phylopstem0.2547105571428571
Phylopflank-0.12556872374999997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure