Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCCTACAAGCAGTTGCT
..((((((((.((.(((((((&)))))))..))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014758
GeneSymbolSNX19
Binding site12968,12990
Score0.923
Seed1
Au0.559
Energy-21.0
Binding len22
Me-8.639
Phylopstem3.720721125
Phylopflank3.032867040537499
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure