Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCCCAGAACAGCACAAGGTATTTGAGAGACAGCTGCAGCTGG
...(((((((((((((.....&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014760
GeneSymbolTATDN2
Binding site2426,2473
Score0.923
Seed0
Au0.5
Energy-24.0
Binding len15
Me-6.515
Phylopstem1.0726982715384614
Phylopflank4.103965195
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure