Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTGATTATTGCAGTTGCC
..(((((((((((....((((&))))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014763
GeneSymbolMRPL19
Binding site5678,5698
Score0.846
Seed1
Au0.676
Energy-18.5
Binding len20
Me-6.782
Phylopstem-0.018416614545454547
Phylopflank0.10131508200000006
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure