Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGGCGGCCGCCTCCGCCACTGCAGCTGCAGC
(((((((((((((.((.((((&.))))..)).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014766
GeneSymbolSCRN1
Binding site20,54
Score0.923
Seed1
Au0.235
Energy-28.2
Binding len24
Me-4.794
Phylopstem1.3825516153846154
Phylopflank0.696414955
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure