Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGCCGAAAGCTGCAGC
((((((((((((((((.....&))))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014767
GeneSymbolSPOCK2
Binding site2836,2857
Score0.846
Seed1
Au0.412
Energy-22.4
Binding len21
Me-3.938
Phylopstem-0.5483480465
Phylopflank-0.4209612963750001
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end3
Position3UTR
2D Structure