Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGGAGCTGGAGCTGCAAG
((((((((.(((((.((....&)).))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014771
GeneSymbolRNF40
Binding site639,657
Score0.923
Seed1
Au0.382
Energy-22.3
Binding len18
Me-5.729
Phylopstem4.93652975
Phylopflank3.1429637800000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure